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External validation of cough-based algorithms for pulmonary tuberculosis screening from the CODA TB DREAM challenge using cough data from Peru

  • Alexandra J. Zimmer
  • , Patricia Espinoza-Lopez
  • , Vijay Ravi
  • , Solveig K. Sieberts
  • , Samira Abbasgholizadeh Rahimi
  • , Madhukar Pai
  • , César Ugarte-Gil
  • , Simon Grandjean Lapierre
  • McGill University
  • McGill University
  • Universidad Peruana Cayetano Heredia
  • Universidad Peruana Cayetano Heredia, Instituto de Medicina Tropical Alexander von Humboldt
  • Amplifier Health
  • Sage Bionetworks
  • Mila – Quebec AI Institute
  • Jewish General Hospital
  • University of Texas
  • Universite de Montreal

Research output: Contribution to journalArticlepeer-review

2 Scopus citations

Abstract

The COugh Diagnostic Algorithm for Tuberculosis (CODA TB) DREAM Challenge recently evaluated the performance of artificial intelligence (AI) algorithms for tuberculosis (TB) screening using cough sounds. Eleven AI models were developed using a dataset of 733,756 cough sounds collected from 2143 adults from seven countries. This study evaluates the CODA Challenge AI models with an external independent cough dataset from Peru. Cough recordings from 303 coughing adults were collected from health facilities in Lima, Peru. The AUCs of the models ranged from 0.480 to 0.615, showing a decrease in performance compared to their performance when internally validated using the CODA Challenge, which ranged from 0.689 to 0.743. The best performing model in the CODA Challenge was also the best performing model in this external validation. Sub-group analyses revealed that models performed better in older (≥ 35 years) populations and among people with prior TB. The external validation revealed limitations in the generalizability of the CODA Challenge models to other settings. While some models showed promise, the overall performance decline highlights the need for continued model validation on external datasets. It also underscores the importance of developing context-specific models to account for population-specific factors that influence cough characteristics and TB prevalence.

Original languageEnglish
Article number24999
JournalScientific Reports
Volume16
Issue number1
DOIs
StatePublished - Dec 2026

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

  1. SDG 3 - Good Health and Well-being
    SDG 3 Good Health and Well-being

Keywords

  • Acoustic epidemiology
  • Cough
  • Diagnostics
  • Machine learning
  • Screening
  • Tuberculosis

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